8000 Observational Health Data Sciences and Informatics · GitHub
[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
Skip to content
@OHDSI

Observational Health Data Sciences and Informatics

Pinned Loading

  1. CommonDataModel CommonDataModel Public

    Definition and DDLs for the OMOP Common Data Model (CDM)

    HTML 956 461

  2. Vocabulary-v5.0 Vocabulary-v5.0 Public

    Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.

    PLpgSQL 240 75

  3. Atlas Atlas Public

    ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

    JavaScript 283 143

  4. Cyclops Cyclops Public

    Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

    C++ 40 33

  5. CohortMethod CohortMethod Public

    An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.

    R 85 63

  6. PatientLevelPrediction PatientLevelPrediction Public

    An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

    R 196 90

Repositories

Showing 10 of 330 repositories
  • DrugAdherenceCharacterization Public

    [Under Development] R package analyzes drug exposure, adherence, and persistence in OMOP CDM. It tracks exposures, calculates metrics like medication possession ratio and proportional days covered, and enhances understanding of real-world usage patterns to improve patient outcomes.

    OHDSI/DrugAdherenceCharacterization’s past year of commit activity
    0 Apache-2.0 0 0 0 Updated May 19, 2025
  • d2e Public

    Data2Evidence is an end-to-end solution for management of OMOP data - https://data2evidence.org

    OHDSI/d2e’s past year of commit activity
    TypeScript 17 Apache-2.0 0 0 19 Updated May 19, 2025
  • BookOfOhdsi-2ndEdition Public

    This repository contains the 2nd edition of the Book

    OHDSI/BookOfOhdsi-2ndEdition’s past year of commit activity
    TeX 0 Apache-2.0 0 6 0 Updated May 19, 2025
  • dbt-synthea Public

    [Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM

    OHDSI/dbt-synthea’s past year of commit activity
    Python 27 Apache-2.0 9 16 2 Updated May 19, 2025
  • bayes-bridge Public

    Bayesian sparse regression with regularized shrinkage and conjugate gradient acceleration

    OHDSI/bayes-bridge’s past year of commit activity
    Jupyter Notebook 20 7 5 0 Updated May 17, 2025
  • OHDSI/CohortPathways’s past year of commit activity
    R 0 2 0 0 Updated May 17, 2025
  • CohortIncidence Public

    Contains the Java and R assets to perform Incidence calculations on a CDM

    OHDSI/CohortIncidence’s past year of commit activity
    R 6 3 6 0 Updated May 17, 2025
  • drat Public

    drat repository for OHDSI R packages

    OHDSI/drat’s past year of commit activity
    5 7 0 0 Updated May 17, 2025
  • StandardizedAnalysisAPI Public

    Interfaces for standardized OHDSI analyses (Cohort Characterization, TxPathway, Incidence Rate etc.) used as an exchange standard or implementation guide

    OHDSI/StandardizedAnalysisAPI’s past year of commit activity
    Java 5 Apache-2.0 4 2 2 Updated May 16, 2025
  • ETL-LambdaBuilder Public

    CDM Builder leveraging AWS Lambda

    OHDSI/ETL-LambdaBuilder’s past year of commit activity
    C# 16 Apache-2.0 16 0 1 Updated May 16, 2025
0