8000 Commits · Roth-Lab/pyclone · GitHub

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Commits

Commits on Aug 19, 2020

Commits on Jul 28, 2020

Commits on Mar 2, 2020

Specify loaders for yaml configs; fixes warning messages
erobitschek
committed

Commits on Apr 4, 2017

bugfix: arguments for plotting functions
amcpherson
committed
feature: option to provide yaml file with override config paramaters for run_analysis_pipeline
amcpherson
committed

Commits on Mar 23, 2017

Commits on Mar 15, 2017

- printing more info for run_analysis
andrew
committed
Catching empty input properly
andrew
committed
- more informative printing during sampling
andrew
committed
- added max_clusters args to control post-processing
andrew
committed
- added support for maximum number of clusters during post-processing
andrew
committed
- raise error when CN is misspecified
andrew
committed
- ignore
andrew
committed
- speed ups using numba and numpy
andrew
committed
- path check for mutations files
andrew
committed
- switched to CLoader for yaml files
andrew
committed
- autopep8
andrew
committed
- added init method support
andrew
committed
- switched to setuptools
andrew
committed

Commits on Sep 27, 2016

added conda package
aroth85
committed
First release of 0.13.x branch
aroth85
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Commits on Feb 15, 2016

Merge with 1f89de8a39d5cc6b58016bec4bda12de1e1de72c
aroth85
committed
bugfix: divide by zero in variant allele freq
aroth85
committed

Commits on Dec 5, 2015

Added tag 0.13.0-b1 for changeset 431b3d0a5491
andrew
committed

Commits on Dec 3, 2015

Added CLI command to setup an analysis
aroth85
committed
Fixed ticks in loci parallel coord plot
aroth85
committed
Fixed scatter when only one sample
aroth85
committed

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