8000 Another error in environment settings · Issue #4 · SVRTK/auto-proc-svrtk · GitHub
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Another error in environment settings #4
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@pepperw1018

Description

@pepperw1018

After I ran this :bash /home/auto-proc-svrtk/scripts/auto-brain-reconstruction.sh /home/data/ /home/data/result/ 1 2.0 0.8 1

The error is:Setting environment ...
/users/PAS1305/xinnanwang/.bashrc: line 11: warning: setlocale: LC_NUMERIC: cannot change locale (es_ES.UTF-8): No such file or directory
/users/PAS1305/xinnanwang/.bashrc: line 19: warning: setlocale: LC_TIME: cannot change locale (en_GB.UTF-8): No such file or directory
rm: cannot remove '/home/tmp_proc/*': No such file or directory

  • input folder : /home/data/
  • output folder : /home/data/result/
  • motion correction mode : 1
  • slice thickness : 2.0
  • output resolution : 0.8
    cp: cannot create directory '/home/tmp_proc/input-files': Permission denied
    find: '/home/tmp_proc/input-files/': No such file or directory
    find: '/home/tmp_proc/input-files/': No such file or directory

ERROR: NO INPUT .nii / .nii.gz FILES FOUND !!!!

Then I tried: 1. Manually create the folder(/home/tmp_proc/input-files), no permission; 2. try to modified the sh file, no permission; 3. try to copy the sh file and modify it, no permission.
But there are nii files in the selected folder.
Does anybody know why this gonna happen?

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