8000 Commits · marbl/canu · GitHub

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Commits

Commits on Aug 5, 2021

Autoset read correction memory

skoren
authored and
brianwalenz
committed

Commits on Aug 4, 2021

Commits on Aug 3, 2021

Commits on Jul 29, 2021

Commits on Jul 14, 2021

Restore -lengths functionality.
brianwalenz
committed

Commits on Jun 30, 2021

Update stageDirectory support to handle collisions and failures.
brianwalenz
committed

Commits on Jun 29, 2021

Commits on Jun 28, 2021

Pass global filter coverage to generateCorrectionLayouts.
brianwalenz
committed
Fix _rare_ crash when placing reads in abnormally short tigs.
brianwalenz
committed
Remove always disabled support for explicitly computing overlap scores, aka the correction global filter.
brianwalenz
committed
Tidy filterCorrectionLayouts.C up a bit.
brianwalenz
committed
Expose expectedCoverage parameter with option -xC; no canu support yet. Replace atoi() and atof().
brianwalenz
committed
Use a clever foreach loop to find the proper MacOS compiler.
brianwalenz
committed
Also report the -minreadsbest thresholds in bogart asm.best.report.
brianwalenz
committed
Fix shell script error introduced in last commit (of this file) causing loss of asm.ctgStore/seqDB.v001.sizes.tx output.
brianwalenz
committed
Add mhapPipe option and make mhap use pipes for output.
brianwalenz
committed

Commits on Jun 25, 2021

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