8000 Placement of reads from orphan contigs · Issue #1661 · marbl/canu · GitHub
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Placement of reads from orphan contigs #1661
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Placement of reads from orphan contigs#1661
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opened on Mar 31, 2020
  • Options seem to be fix or disable.
  • Currently has implementation issues with choosing correct placement.
  • Also somehow placing bad reads (e.g. lopsided).
  • How can they be essential for contig breaking if bubbles are not?

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