8000 Refactor logic for queueing up images for processing by motioncor2 and ctffind4 · Issue #2 · nysbc/appion · GitHub
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Refactor logic for queueing up images for processing by motioncor2 and ctffind4 #2
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@jpellman

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@jpellman

Currently, Appion iterates over a list of all images within a session, performs a check to see if the image has already been processed, and then adds it to a queue if it hasn't been processed. This operation can take a long time ( O(n) with high overhead for checking ) and for large datasets it can take as long as 15 minutes to populate the queue of images that need to be processed. We need to find a way to do this faster because otherwise the list of unprocessed images will grow prohibitively large (i.e., there's a feedback loop here).

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