8000 Missing TutorialChannels and command to compile them · Issue #163 · nest/NEAT · GitHub
[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
Skip to content
Missing TutorialChannels and command to compile them #163
Open
@SteMasoli

Description

@SteMasoli

Hi.

I'm trying to run models.ipynb (under the tutorial directory) and it get stuck to this line:

FileNotFoundError                         Traceback (most recent call last)
Cell In[20], line 2
      1 from neat import NeuronSimTree, load_neuron_model
----> 2 load_neuron_model('TutorialChannels')
      4 sim_tree.init_model(t_calibrate=100.)

File ~/temp_env/lib/python3.12/site-packages/neat/simulations/neuron/neuronmodel.py:101, in load_neuron_model(name)
     99 else:
    100     path_name = os.path.join(os.path.dirname(__file__), "tmp/")
--> 101     raise FileNotFoundError(
    102         f"The NEURON model named '{name}' is not installed. "
    103         f"Run 'neatmodels -h' in the terminal for help on "
    104         f"installing new NEURON models with NEAT. "
    105         f"Installed models will be in '{path_name}'."
    106     )

FileNotFoundError: The NEURON model named 'TutorialChannels' is not installed. Run 'neatmodels -h' in the terminal for help on installing new NEURON models with NEAT. 

There is no TutorialChannels directory under tutorials.


Under examples, the command to compile the channels it is not working.
The "-h" contains names that are completely different compared to the following command.

"These are examples of how to obtain simplified compartmental models with NEAT.
To run these examples, first compile the required ionchannels. From the
examples/ directory, run:
::

compilechannels models/channels/"

Which is the correct way to install the channels?

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions

      0