8000 new module: vizgenpostprocessing/preparesegmentation​ · Issue #8441 · nf-core/modules · GitHub
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new module: vizgenpostprocessing/preparesegmentation​ #8441

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mcmero opened this issue May 13, 2025 · 0 comments
Open
4 tasks done

new module: vizgenpostprocessing/preparesegmentation​ #8441

mcmero opened this issue May 13, 2025 · 0 comments
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mcmero commented May 13, 2025 •
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Is there an existing module for this?

  • I have searched for the existing module

Is there an open PR for this?

  • I have searched for existing PRs

Is there an open issue for this?

  • I have searched for existing issues

Further Information

https://github.com/Vizgen/vizgen-postprocessing -- cell segmentation and report generation tool for MERSCOPE spatial omics instrument. The plan would be to start with preparesegmentation, then add runsegmentationontile​ and compiletilesegmentation​ as new modules.

Are you going to work on this?

  • If I'm planning to work on this module, I added myself to the Assignees to facilitate tracking who is working on the module
@mcmero mcmero changed the title new module: vizgenpostprocessing/prepare-segmentation​ new module: vizgenpostprocessing/preparesegmentation​ May 13, 2025
@mcmero mcmero added the new module Adding a new module label May 14, 2025
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