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Description
Description of feature
To implement this feature we need to
- Add an optional
variantcolumn in the input samplesheet - Copy the
epytopemodule and vcf splitting logic from https://github.com/nf-core/epitopeprediction - Create a fasta containing mutated protein sequences
- Concat sample-specific fasta with
--fastainput - Generate decoys
- Give comet the concatenated sample-specific fasta
Additionally, make sure if no vcf is provided, that the decoy database is generated only once