8000 Avoid redundant index-generation in Sentieon-flow. · Issue #1046 · nf-core/sarek · GitHub
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Avoid redundant index-generation in Sentieon-flow. #1046
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@asp8200

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@asp8200

Description of feature

The sentieon-bwamem module actually generate index-files (default behaviour, cannot be disabled) but currently Sarek recomputes the index-files, since that is what is done for the other aligners. It would be great if we could avoid the redundant index generation when Sarek uses Sentieon-bwamem for alignment.

520D

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