10000 Pangoli module update: Include pango-designation version · Issue #441 · nf-core/viralrecon · GitHub
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Pangoli module update: Include pango-designation version #441

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Shettland opened this issue Sep 4, 2024 · 1 comment
Open

Pangoli module update: Include pango-designation version #441

Shettland opened this issue Sep 4, 2024 · 1 comment
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enhancement Improvement for existing functionality
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@Shettland
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Description of feature

Although pangolin software version is already included in the yml file, there's an important feature that impacts lineage designation greatly, which is pango-designation version. I think including the version of this database (a.k.a pango-data) is key when reproducing the analysis, as using a different version of the database may lead to a different lineage designation, even when the software version is the same.

I'd say to include it in versions.yml, but could also be included elsewhere.

@Shettland Shettland added the enhancement Improvement for existing functionality label Sep 4, 2024
@svarona svarona added this to the 2.7 milestone Feb 13, 2025
@saramonzon
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Modify nf-core/pangolin module so pango-designation is also included in versions.yml

@saramonzon saramonzon changed the title Include pango-designation version Pangoli module update: Include pango-designation version Mar 21, 2025
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