8000 GeneratedBy field isn't inherited/modified correctly · Issue #70 · nipreps/fmripost-aroma · GitHub
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GeneratedBy field isn't inherited/modified correctly #70
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@tsalo

Description

@tsalo

What happened?

I ran fMRIPost-AROMA on a dataset I'd run through fMRIPrep and the GeneratedBy field in the dataset_description.json didn't include the fMRIPrep entry from the input dataset.

What command did you use?

fmripost-aroma \
    /data \
    /out \
    participant \
    --participant-label 01 \
    -w /work/ \
    --omp-nthreads 20 \
    --nprocs 20 \
    --mem_mb 40000 \
    --aggregate-session-reports 1 \
    --denoising-method aggr nonaggr orthaggr \
    --skip-bids-validation

What version of fMRIPost-AROMA are you running?

0.1.dev1+g24a0dcf

How are you running fMRIPost-AROMA?

Singularity

Is your data BIDS valid?

Yes

Are you reusing any previously computed results?

Anatomical derivatives

Please copy and paste any relevant log output.

I'd expect GeneratedBy to be:

"GeneratedBy": [
    {
        "Name": "fMRIPost-AROMA",
        "Version": "0.1.dev1+g24a0dcf",
        "CodeURL": "https://github.com/nipreps/fmripost_aroma/archive/0.1.dev1+g24a0dcf.tar.gz"
    },
    {
        "Name": "fMRIPrep",
        "Version": "24.0.0",
        "CodeURL": "https://github.com/nipreps/fmriprep/archive/24.0.0.tar.gz"
    }
]

Instead it's just:

"GeneratedBy": [
    {
        "Name": "fMRIPost-AROMA",
        "Version": "0.1.dev1+g24a0dcf",
        "CodeURL": "https://github.com/nipreps/fmripost_aroma/archive/0.1.dev1+g24a0dcf.tar.gz"
    }
]

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