8000 Commits · alenzhao/htslib · GitHub

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Commits

Commits on Oct 3, 2016

Commits on Sep 30, 2016

Use <inttypes.h> instead of old WIN32-specific code
jmarshall
committed

Commits on Sep 27, 2016

Bug fix: 0 is a valid return value of bcf_hrec_find_key
pd3
committed

Commits on Sep 26, 2016

Fix bugs in bam_aux_update_str()

jenniferliddle
authored and
jmarshall
committed

Commits on Sep 14, 2016

Commits on Sep 13, 2016

Commits on Sep 9, 2016

Commits on Sep 7, 2016

Treat regions [-1,n) as [0,n) when indexing
jmarshall
committed

Commits on Sep 5, 2016

Added bgzip to check/test dependency.
jkbonfield
committed
Rebased PR#387 and minor code formatting fixes (trailing white space,
jkbonfield
committed
Added bgzip test files.

Joe Rayner
authored and
jkbonfield
committed
Added bgzf_block_write() and rebgzip option.

Joe Rayner
authored and
jkbonfield
committed

Commits on Aug 31, 2016

[tabix man page] Note coordinate arguments are 1-based inclusive
jmarshall
committed

Commits on Aug 30, 2016

Discard distant chunks based on binning index, not linear index
jmarshall
committed

Commits on Aug 19, 2016

Embed version number directly in hfile_libcurl plugin
jmarshall
committed

Commits on Aug 17, 2016

Remove iRODS plugin, which has moved to samtools/htslib-plugins
jmarshall
committed

Commits on Aug 4, 2016

Commits on Aug 1, 2016

Commits on Jul 28, 2016

Allow plugins to select RTLD_LOCAL or RTLD_GLOBAL
jmarshall
committed

Commits on Jul 26, 2016

Allocate BGZF::uncompressed_block/compressed_block together
jmarshall
committed

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