8000 Add recombination map to initial ts in examples · Issue #49 · ashander/ftprime · GitHub
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Add recombination map to initial ts in examples #49

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ashander opened this issue Nov 1, 2017 · 3 comments
Open

Add recombination map to initial ts in examples #49

ashander opened this issue Nov 1, 2017 · 3 comments

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@ashander
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ashander commented Nov 1, 2017

raised in #48
@ashander ashander mentioned this issue Nov 1, 2017
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@hyanwong
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hyanwong commented Nov 2, 2017

Also (importantly) need to add Ne

@ashander
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ashander commented Nov 2, 2017 via email

@hyanwong
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hyanwong commented Nov 2, 2017 •
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E.g.

rcmb_map = msprime.RecombinationMap.uniform_map(length, recomb_rate, length)
init_ts = msprime.simulate(2*len(first_gen), Ne=popsize, recombination_map=rcmb_map)

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