8000 OME-NGFF v0.5 (with Zarr v3) implementation plan · Issue #271 · czbiohub-sf/iohub · GitHub
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OME-NGFF v0.5 (with Zarr v3) implementation plan #271
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@ziw-liu

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@ziw-liu

Rough steps towards #257:

  • Add dispatch to handle both NGFF v0.4 and v0.5 metadata, mostly in iohub.ngff.nodes. The schema itself stays the same between v0.4 and v0.5 so iohub.ngff.models can largely stay untouched. However note that there are added constraints on the Zarr dimension names (part of Zarr v3 spec) outside of the OME field. The goal is to default to v0.5 for creation of new datasets, but still maintain r/w of v0.4 datasets.
  • Update the converter to write v0.5.

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