10000 Issues with install dependencies · Issue #37 · dariober/cnv_facets · GitHub
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Issues with install dependencies #37
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@umasaxena

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@umasaxena

Hello, I installed cnv_facts via bioconda and i seem to getting the desired parameter info via --help. However whilst running on bam files; I get the following error -

[2021-05-28 14:08:48] Loading file F00105616_BRCA.csv.gz...
Error in scan(file = file, what = what, sep = sep, quote = quote, dec = dec,  : 
  line 1 did not have 7 elements
Calls: data.table -> read.table -> scan
Execution halted

Should I manually install R package data.table in the conda environment. Any suggestion is appreciated. I am using R version 4.x.x version.

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