8000 Commits · dosumis/CellphoneDB · GitHub

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Commits

Commits on Feb 21, 2024

Corrected method call
Robert Petryszak
committed
Removed superfluous code
Robert Petryszak
committed

Commits on Feb 13, 2024

Merge branch 'master' of github.com:ventolab/CellphoneDB
Robert Petryszak
committed
Fixed a tutorial link
Robert Petryszak
committed

Commits on Jan 9, 2024

Merge pull request #164 from partrita/patch-1
datasome
authored

Commits on Jan 2, 2024

Added comment
Robert Petryszak
committed

Commits on Dec 28, 2023

Update RESULTS-DOCUMENTATION.md
partrita
authored

Commits on Dec 5, 2023

Fixed to reflect the latest package version
Robert Petryszak
committed

Commits on Nov 27, 2023

In the call() method for all three analysis methods, fixed to allow counts_file_path to be either the path to a counts file, or an in-memory AnnData object. I chose not to generalise the variable n…
Robert Petryszak
committed
Removed superfluous files - superceded by pyproject.toml
Robert Petryszak
committed
Added MIT license file
Robert Petryszak
committed

Commits on Nov 21, 2023

Corrected description of the pvalues fields
Robert Petryszak
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Commits on Nov 14, 2023

Added pytest dependency for poetry
Robert Petryszak
committed
Added information about transcription_factor_input
Robert Petryszak
committed
Fixed typos
Robert Petryszak
committed

Commits on Nov 2, 2023

Fixed erroneous comment on the number of microenviroments in the test data
Robert Petryszak
committed

Commits on Oct 31, 2023

Merge branch 'master' of github.com:ventolab/CellphoneDB
Robert Petryszak
committed
Update version to 5.0.0
Robert Petryszak
committed
Merge branch 'master' of github.com:ventolab/CellphoneDB
Robert Petryszak
committed
Merge branch 'master' into scoring
Robert Petryszak
committed
Removed a testing notebook before software release
Robert Petryszak
committed
Make transcription_factor_input available for browsing if rel_version > v5.0
Robert Petryszak
committed
Allow user to view transcription_factor_input (available in cellphone-data v5.0.0 or later
Robert Petryszak
committed
Added data format advice for user's input files - based on recent GitHub issues
Robert Petryszak
committed
Added data format advice for user's input files - based on recent GitHub issues
Robert Petryszak
committed

Commits on Oct 19, 2023

Added file
Robert Petryszak
committed
Fixed typo
Robert Petryszak
committed
GitHub actions workflow for unit testing and linter
Robert Petryszak
committed
Incorporated the remaining linter suggestions
Robert Petryszak
committed
Incorporating linter suggestions (WIP)
Robert Petryszak
committed

Commits on Oct 18, 2023

Fixed method signature
Robert Petryszak
committed
Broken the one method in cellsign.py into smaller methods, following linter suggestion
Robert Petryszak
committed
Experimenting with GitHub actions (WIP)
Robert Petryszak
committed
Testing if GitHub actions workflow kicks off after git push
Robert Petryszak
committed
Moved workflow temporarily to scoring branch (still testing)
Robert Petryszak
committed

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