8000 viewAlign feature in new version of PACEtomo · Issue #31 · eisfabian/PACEtomo · GitHub
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viewAlign feature in new version of PACEtomo #31
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@RuchaoPeng

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@RuchaoPeng

Hi Fabian,

I have been using PACE tomo for a while and find it very helpful. Thank you so much for sharing this amazing program! I've recently encountered some issues for the new version.

  1. I noticed a new feature "viewAlign" is added. As far as I understand, it seems to align the view image with buffer P to refine targeting of each point in the group. This would be very helpful for more precise targeting instead of using a constant pattern defined by two vectors, as some local distortion may break the pattern. I tried to used this feature for my data collection but had some issues with incompatible python version. Could you provide some guidcance which version of SerialEM and python should be used for the latest version of PACE-tomo?
  2. I found the "save views" function stopped working somehow. It didn't report any error but just not doing anything. It used to work with serialEM verion 4.0 a few months ago. We had an update of SerialEM to v4.1.2, and now it stopped working with either the old or new target selection script.

Any suggestions would be highly appreciated!

Thanks,
Ruchao

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