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- 2 commits
- 7 files changed
- 2 contributors
Commits on Jun 13, 2025
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Add comprehensive local testing framework with golden master verifica…
…tion This commit introduces a 4-layer testing architecture for LAAVA: 1. **Unit Tests** (test_unit_laava_modules.py) - Direct testing of LAAVA Python modules (prepare_annotation, summarize_alignment) - 11 tests covering core functions, error handling, and data integrity - Comprehensive documentation explaining test purpose and value 2. **Integration Tests** (test_integration_duplicate_removal.py) - End-to-end pipeline validation focusing on duplicate removal behavior - 6 tests validating data integrity and business logic - Clear documentation distinguishing from unit tests 3. **Golden Master Verification** (test_output_gold_verification.py) - Naive catch-all content verification using SHA256 hashes - 14 tests detecting ANY changes in pipeline outputs - Handles gzip timestamp issues by hashing decompressed content - Forces conscious decisions about output changes 4. **Enhanced Test Infrastructure** - Updated Makefile with test-local target running all 47 tests - Updated test/Makefile with comprehensive local testing - Updated README.md with comprehensive testing documentation - Updated src/make_report.sh for better local testing support - Clear separation of test types and their purposes Key Features: - 47 total tests (100% passing) - Deterministic golden master verification (fixed gzip timestamp issues) - Comprehensive documentation for maintainability - Easy local testing workflow: 'make test-local'
Commits on Jul 1, 2025
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Merge pull request #106 from formbio/mat/local-testing-and-gold-data-…
…testing Add comprehensive local testing framework with golden master verifica…
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