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It seems the 0.20.2 last version of xarray mapplot tool the https://usegalaxy.eu/root?tool_id=toolshed.g2.bx.psu.edu/repos/ecology/xarray_mapplot/xarray_mapplot/0.18.2+galaxy0 is not working properly.
Command Line
mkdir output_dir && mkdir -p `pwd`/mlp_tmpdir && MPLCONFIGDIR=`pwd`/mlp_tmpdir && echo "Galaxy xarray version 0.20.2" > /data/jwd/main/047/229/47229418/outputs/galaxy_dataset_bcea2075-2f6b-435d-9fbf-e34b093ef2fc.dat && python '/opt/galaxy/shed_tools/toolshed.g2.bx.psu.edu/repos/ecology/xarray_mapplot/dc05bf0af58f/xarray_mapplot/xarray_mapplot.py' '/data/dnb02/galaxy_db/files/020/110/dataset_20110467.dat' 'nh4' --config '/data/jwd/main/047/229/47229418/configs/tmp99x1aueb' --proj '/data/jwd/main/047/229/47229418/configs/tmpnk2bkrsk' --output plot.png --verbose && mv *.png output_dir
stderr
Matplotlib is building the font cache; this may take a moment.
Traceback (most recent call last):
File "/opt/galaxy/shed_tools/toolshed.g2.bx.psu.edu/repos/ecology/xarray_mapplot/dc05bf0af58f/xarray_mapplot/xarray_mapplot.py", line 400, in <module>
dset = MapPlotXr(input=args.input, varname=args.varname,
File "/opt/galaxy/shed_tools/toolshed.g2.bx.psu.edu/repos/ecology/xarray_mapplot/dc05bf0af58f/xarray_mapplot/xarray_mapplot.py", line 86, in __init__
f.read().replace("\n", "").split('{')[1].split('}')[0]
IndexError: list index out of range
Matplotlib is building the font cache; this may take a moment.
Traceback (most recent call last):
File "/opt/galaxy/shed_tools/toolshed.g2.bx.psu.edu/repos/ecology/xarray_mapplot/dc05bf0af58f/xarray_mapplot/xarray_mapplot.py", line 400, in <module>
dset = MapPlotXr(input=args.input, varname=args.varname,
File "/opt/galaxy/shed_tools/toolshed.g2.bx.psu.edu/repos/ecology/xarray_mapplot/dc05bf0af58f/xarray_mapplot/xarray_mapplot.py", line 86, in __init__
f.read().replace("\n", "").split('{')[1].split('}')[0]
IndexError: list index out of range
rm: cannot remove '/data/jwd/main/047/229/47229418/tmp/out.1468666': No such file or directory
rm: cannot remove '/data/jwd/main/047/229/47229418/tmp/err.1468666': No such file or directory
Here an history where I tried to re-run the new version exactly with same parameters and input files as the 0.18 version and where I have this stderr mentionned before.
Any idea @annefou ?
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