8000 scVelo() Error in installConda() : conda installation failed with status code '1' · Issue #47 · kevinrue/velociraptor · GitHub
[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
Skip to content

scVelo() Error in installConda() : conda installation failed with status code '1' #47

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom
Open
shijianasdf opened this issue Aug 11, 2021 · 3 comments
Open

scVelo() Error in installConda() : conda installation failed with status code '1' #47

shijianasdf opened this issue Aug 11, 2021 · 3 comments

Comments

@shijianasdf
Copy link

When I try to run the scvelo() function I get the following error message (see attached picture).

截屏2021-08-12 上午7 30 59
@LTLA
Copy link
Collaborator
LTLA commented Aug 12, 2021

You should post errors in formatted code blocks rather than taking screenshots, it's hard for me to read.

I can make out a MD5 sum mismatch, which pretty much says it all. I would guess that the download of the installer was interrupted or corrupted at some point, as discussed here. Suggest going to:

dirname(basilisk.utils:::getExternalDir())

and deleting the old installer. Then restart your R session and try running scvelo() again.

@shijianasdf
Copy link
Author

You should post errors in formatted code blocks rather than taking screenshots, it's hard for me to read.

I can make out a MD5 sum mismatch, which pretty much says it all. I would guess that the download of the installer was interrupted or corrupted at some point, as discussed here. Suggest going to:

dirname(basilisk.utils:::getExternalDir())

and deleting the old installer. Then restart your R session and try running scvelo() again.

Thanks for your advice.
After go to:

dirname(basilisk.utils:::getExternalDir())

I found a folder containing "Miniconda3-py37_4.8.3-MacOSX-x86_64.sh" and i delete the folder.
then i download the package again, I run scVelo() again and got the following error message:

试开URL’https://repo.anaconda.com/miniconda/Miniconda3-py37_4.8.3-MacOSX-x86_64.sh'
Error in download.file(url, fname, mode = "wb") : 
无法打开URL'https://repo.anaconda.com/miniconda/Miniconda3-py37_4.8.3-MacOSX-x86_64.sh'
此外: Warning message:
In download.file(url, fname, mode = "wb") :
URL 'https://repo.anaconda.com/miniconda/Miniconda3-py37_4.8.3-MacOSX-x86_64.sh': status was 'Couldn't resolve host >name'

I think the network is bad and the files are not downloaded

@LTLA
Copy link
Collaborator
LTLA commented Aug 13, 2021

Yes, that would also be my conclusion. You could try downloading the installer manually and sticking the file in that directory, hopefully it should trick basilisk into using it.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@LTLA @shijianasdf
0