10000 Use CHEBI OBO Slim instead to build the CHEBI import module · Issue #34 · rsc-ontologies/rsc-cmo · GitHub
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Use CHEBI OBO Slim instead to build the CHEBI import module #34
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@StroemPhi

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@StroemPhi

As mentioned by Nico in the ODK migration PR (#31), it would be less memory consuming, if we used the CHEBI OBO Slim instead of CHEBI as source to build our CHEBI import module from. But currently this slim version is missing terms we need in CHMO. So we need to add these to the slim version first, before we can use it as source.

Originally posted by @matentzn in #31 (comment):

FYI most of our ontologies now use https://github.com/obophenotype/chebi_obo_slim to avoid huge memory requirements; you as technical experts in this area would be very welcome to help curate/evolve.

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