This GitHub Organisation contains mirrors of toolboxes compatible with the SPM software.
If you want to report an issue or open a pull request for one of these toolboxes, please do so on their upstream repository.
To report a problem in the interaction between one of these toolboxes and SPM you can use the SPM repository.
- ArtRepair: ArtRepair for robust fMRI
- Automatic Analysis (aa): Pipeline system for neuroimaging
- BrainNet Viewer: Brain network visualization tool
- CAT12: Computational Anatomy Toolbox for SPM12
- Clinical: Clinical Toolbox for SPM
- CONN: Functional connectivity toolbox
- CTseg: Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation
- DPABI: Toolbox for Data Processing & Analysis of Brain Imaging
- ExploreASL: Pipeline and toolbox for image processing and statistics of arterial spin labeling perfusion MR images
- FieldTrip: Toolbox for MEG, EEG and iEEG analysis
- GIFT: Group ICA/IVA software
- hMRI: Toolbox for quantitative MRI and in vivo histology using MRI
- JuBrain Anatomy Toolbox: Combining probabilistic cytoarchitectonic maps and functional imaging data
- Lead-DBS: Toolbox facilitating deep brain stimulation electrode locations and connectomic imaging
- Marsbar: Region of interest toolbox for SPM
- MRM: Multivariate and Repeated Measures for Neuroimaging
- PALM: Permutation Analysis of Linear Models
- rsHRF: Toolbox for Resting State HRF Deconvolution and Connectivity Analysis
- SnPM: Statistical NonParametric Mapping
- SPMd: Statistical Parametric Mapping Diagnosis
- SPMMouse: Toolbox for SPM in the Animal Brain
- SUIT: Toolbox for the analysis of cerebellar imaging data
- SwE: Toolbox implementing the Sandwich Estimator for SPM
- TAPAS: Translational Algorithms for Psychiatry-Advancing Science
All the toolboxes listed here have their source code available on GitHub and should be compatible with the latest public release of SPM. For a more complete list of toolboxes, check the SPM website.
All the forks are kept up-to-date thanks to GitHub App Pull.
To suggest adding a toolbox or extension, please create an issue or contact us at fil.spm@ucl.ac.uk ✍️