Starred repositories
Rust crates for working with Workflow Description Language (WDL) documents.
📈 The fastest (for very small maps!) alternative of Rust HashMap, which doesn't use hashing and doesn't use heap (aka "linear map")
A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
Integrate the DeepSeek API into popular softwares
Score-based 3D molecule generation with neural fields
gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.
Snakemake workflow management system and CLI generation tool
A curated list of awesome self-learning materials in Computational Structural Biology, such as sources, tutorials, etc.
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Updated Sep 6, 2022
A trainable PyTorch reproduction of AlphaFold 3.
Official Repository of the "Exploring Vaccine Hesitancy in Digital Public Discourse: From Tribal Polarization to Socio-Economic Disparities" paper.
scooby: Modeling multi-modal genomic profiles from DNA sequence at single-cell resolution.
A Snakemake executor plugin for submitting jobs to a SLURM cluster
A simple, fast and user-friendly alternative to 'find'
A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design
AutoGPT is the vision of accessible AI for everyone, to use and to build on. Our mission is to provide the tools, so that you can focus on what matters.
LLM based autonomous agent that conducts deep local and web research on any topic and generates a long report with citations.