8000 [Analyze 1297] Add FHIR pa and cdmconfig by brandantck · Pull Request #96 · OHDSI/d2e · GitHub
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[Analyze 1297] Add FHIR pa and cdmconfig #96

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[Analyze 1297] Add FHIR pa and cdmconfig #96

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@brandantck brandantck commented Apr 30, 2025 •
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  1. Questionnaire response question text is hardcoded. Query index is also hardcoded.

  2. For Given Name

    replace(
  list_reduce(
    CAST(@PATIENT.content->'$.name[*].given[*]' AS varchar[]), 
    (acc, e) -> concat(acc, ' ', e)), 
  '\"',  ''
)

  3. For questionnaire response questions with multiple answers

    replace( 
  list_reduce(
    CAST(
        list_transform(@QUESTIONNAIRERESPONSE.content.item[0].answer::json[], e -> e.valueCoding.display)
        AS varchar[]
      ),
    (acc, e) -> concat(acc, ', ', e) 
  ), 
  '\"', '' 
)

  4. For questionnaire response questions with single answers

    replace( @QUESTIONNAIRERESPONSE.content.item[1].answer[0].valueString, '\"', '' )

For filters to work as per below, env USE_LIKE_SEARCH=true must be added.
Examples

  • All patients
    image

  • Filter on q1 Stren
    image

  • Filter on q3 Yes
    image

  • Domain values search
    image

Merge Checklist

Please cross check this list if additions / modifications needs to be done on top of your core changes and tick them off. Reviewer can as well glance through and help the developer if something is missed out.

  • Automated Tests (Jasmine integration tests, Unit tests, and/or Performance tests)
  • Updated Manual tests / Demo Config
  • Documentation (Application guide, Admin guide, Markdown, Readme and/or Wiki)
  • Verified that local development environment is working with latest changes (integrated with latest develop branch)
  • following best practices in code review doc

@brandantck brandantck marked this pull request as ready for review May 16, 2025 09:21
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@csafreen csafreen Awaiting requested review from csafreen csafreen is a code owner

@SantanM SantanM Awaiting requested review from SantanM SantanM is a code owner

@satish-a0 satish-a0 Awaiting requested review from satish-a0 satish-a0 is a code owner

@suwarnoong suwarnoong Awaiting requested review from suwarnoong suwarnoong is a code owner

@p-hoffmann p-hoffmann Awaiting requested review from p-hoffmann p-hoffmann is a code owner

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