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Open source code for AlphaFold 2.

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AlphaFold2 non-docker setup

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python tools for TCR:peptide-MHC modeling and analysis

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A toolkit for single-cell immune profiling

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📚 Tools and databases for analyzing HLA and VDJ genes.

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Visual Interactive Analysis of Molecular Dynamics

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Github for files currently published in the IPD-IMGT/HLA FTP Directory hosted at the European Bioinformatics Institute

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MDplot: Visualise Molecular Dynamics

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TFold v1.0

Python 31 6 Updated Jul 16, 2024

A WordPress theme that is built with AI-assisted reading features, colorful, user-friendly, well-rounded, and rich in functionalities. Support Chinese, English, Japanese, Français (soutien de base)…

PHP 3,577 400 Updated Jul 6, 2025

Open-source foundation of the user-sponsored PyMOL molecular visualization system.

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Landing Page/HUB for all WESTPA Tutorials

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A publicly available, auto-updating database of peptide/HLA structures (HLA3DB) + structural modeling of peptide/HLA complexes (RepPred)

Python 1 Updated Dec 10, 2024

WESTPA: The Weighted Ensemble Simulation Toolkit with Parallelization and Analysis

Python 203 58 Updated Jul 1, 2025

Python implementation of the Ramachandran plot

Python 48 14 Updated D 5A15 ec 13, 2019

LaTeX style for Notre Dame Dissertations. We will need to continue to keep this available, even after Curate is retired. Or we will need to transfer ownership to the Graduate School.

TeX 48 47 Updated Apr 11, 2025

CCP4 DIALS User Interface

Python 6 4 Updated Jul 30, 2024

Tutorials for DIALS

Python 7 4 Updated May 1, 2025

A PHP Blogging Platform. Simple and Powerful.

PHP 11,902 2,084 Updated Jul 4, 2025

Geometrical approach to characterise the pMHC/TCR binding modes

Python 6 Updated Oct 21, 2019

Web Extension for sniffing and downloading HTTP Live streams (HLS)

JavaScript 2,236 274 Updated Mar 12, 2025
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