Stars
Dockerfiles and metadata for XNAT's container service
Data and code supporting Hansen et al., 2022 Nature Neuroscience "Mapping neurotransmitter systems to the structural and functional organization of the human neocortex"
Canonical Correlation Analysis Zoo: A collection of Regularized, Deep Learning based, Kernel, and Probabilistic methods in a scikit-learn style framework
Impaired decision-making in mice. Analysis scripts etc.
Online NIfTI voxels to triangulated mesh conversion
The repository provides code for running inference with the SegmentAnything Model (SAM), links for downloading the trained model checkpoints, and example notebooks that show how to use the model.
Two-dimensional subcortex data viz package
BRAIN-TO / presurfer
Forked from srikash/presurferScripts to prepare MP2RAGE for Freesurfer
Raspberry Pi stratum 1 PTP and NTP timeserver configuration.
Enhance resolution by capturing many images with off-axis illumination and combining in Fourier space. Adapted from https://github.com/Waller-Lab/FPM
Installing PsychoPy on Linux can be challenging, so I've created an installer to make the process easier and more streamlined.
⬛️ CLI tool and library for saving complete web pages as a single HTML file
Code used for postprocessing analyses in manuscript "Modeling brain dynamics after tumor resection using The Virtual Brain" (Aerts et al. 2019; bioRxiv).
Code used for postprocessing analyses in manuscript "Modeling brain dynamics in brain tumor patients using The Virtual Brain" (Aerts et al. 2018; eNeuro, 5 (3) ENEURO.0083-18.2018; DOI: https://doi…
pytorch implementation of computational nodes to support fast approximate Bayesian inference for directed graphical models
Base Distributions and Examples for Fast VBEM in Matlab
Julia Package for MRI Reconstruction
DECENT: a deep learning-based method to fully exploit the spatiotemporal correlation prior to CEST image denoising.