Stars
Code for ISBI 2023 paper "Self Pre-training with Masked Autoencoders for Medical Image Classification and Segmentation"
Implementation of different kinds of Unet Models for Image Segmentation - Unet , RCNN-Unet, Attention Unet, RCNN-Attention Unet, Nested Unet
A PyTorch implementation for V-Net: Fully Convolutional Neural Networks for Volumetric Medical Image Segmentation
Use of Attention Gates in a Convolutional Neural Network / Medical Image Classification and Segmentation
Implementations of recent research prototypes/demonstrations using MONAI.
Statsmodels: statistical modeling and econometrics in Python
The code of the ProtoSeg for interpretation of segmentation maps
Paper Lists for Graph Neural Networks
Pretrained neural networks for UK Biobank brain MRI images. SFCN, 3D-ResNet etc.
A Deep Graph Neural Network Architecture for Modelling Spatio-temporal Dynamics in rs-fMRI Data
Stable Diffusion web UI
PyTorch implementation of TabNet paper : https://arxiv.org/pdf/1908.07442.pdf
Harmonization of multi-site imaging data with ComBat
Advanced AI Explainability for computer vision. Support for CNNs, Vision Transformers, Classification, Object detection, Segmentation, Image similarity and more.
Latex code for making neural networks diagrams
MVPANI: A Toolkit With Friendly Graphical User Interface for Multivariate Pattern Analysis of Neuroimaging Data
Extract brain and remove skulls from brain CT and CTA images
This repository includes the official project of TransUNet, presented in our paper: TransUNet: Transformers Make Strong Encoders for Medical Image Segmentation.
[IEEE TMI] Official Implementation for UNet++
A small package to create visualizations of PyTorch execution graphs
[ICIVC 2019] "LSTM multi-modal UNet for Brain Tumor Segmentation"
A fast medical imaging analysis library in Python with algorithms for registration, segmentation, and more.
Fast and flexible image augmentation library. Paper about the library: https://www.mdpi.com/2078-2489/11/2/125
Medical imaging processing for AI applications.
Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)