What's Changed
- Update multimodal integration documentation by @wlason in #302
- Update pipeline.yml by @bio-la in #305
- Update run_filter.py by @deevdevil88 in #298
- Update run_scib.py by @JarneBelien in #303
- LSI-enabled BBKNN by @wlason in #301
- Update run_scanpyQC_rna.py by @wlason in #317
- Fix dsb background by @wlason in #314
- Add Run option params LISI and SCIB metrics for pipeline_integration.py by @deevdevil88 in #321
- added check for duplicated rows in submission file by @bio-la in #324
- Threads documentation by @giuliaelgarcia in #288
- Update qc.md by @bio-la in #327
- PlotQC.R errors on making plots when you have many samples, adding LimitSize=False by @deevdevil88 in #323
- From MuData to SpatialData by @SarahOuologuem in #319
New Contributors
- @JarneBelien made their first contribution in #303
Full Changelog: v.1.1.0...v.1.20