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  • GALBA Public

    Forked from Gaius-Augustus/GALBA

    GALBA is a pipeline for fully automated prediction of protein coding gene structures with AUGUSTUS in novel eukaryotic genomes for the scenario where high quality proteins from one or several close…

    Perl Other Updated Jan 27, 2025
  • Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

    JavaScript MIT License Updated Sep 24, 2024
  • Phylogenetics for NBI summer school

    GNU General Public License v3.0 Updated Jul 12, 2024
  • Scripts, information and data for publication in APPS.

    Python 5 GNU General Public License v2.0 Updated May 2, 2024
  • sourmash Public

    Forked from sourmash-bio/sourmash

    Quickly search, compare, and analyze genomic and metagenomic data sets.

    Python Other Updated Jul 9, 2023
  • miRge3.0 Public

    Forked from mhalushka/miRge3.0

    Comprehensive analysis of small RNA sequencing data

    Python MIT License Updated Jun 2, 2023
  • exceRpt Public

    Forked from gersteinlab/exceRpt

    Software for preprocessing, filtering, alignment, and reporting of smallRNA-seq datasets

    HTML GNU General Public License v3.0 Updated Apr 13, 2023
  • mirandmore2 Public

    Forked from egaffo/mirandmore2

    🔬 A bioinformatics software pipeline to characterize miRNAs and moRNAs from small RNA-seq data

    Python Other Updated Feb 21, 2023
  • metagraph Public

    Forked from ratschlab/metagraph

    Scalable annotated de Bruijn graphs for DNA indexing, alignment, and assembly

    C++ GNU General Public License v3.0 Updated Jun 2, 2022
  • miRWoods Public

    Forked from hendrixlab/miRWoods

    miRWoods - stacked random forests for the sensitive detection of microRNAs

    Perl Updated Jul 5, 2019
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