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HarteminkLab

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  1. NucID NucID Public

    A Python package for identifying nucleosomes using single-end DNase-seq data

    Jupyter Notebook 5

  2. RoboCOP RoboCOP Public

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  3. cadmium-paper cadmium-paper Public

    Scripts for processing, analyzing, and visualizing MNase-seq, RNA-seq cadmium perturbation time course

    Python 2

  4. TOP TOP Public

    R package to predict TF occupancy using DNase-seq or ATAC-seq data

    R 1 1

  5. COMPETE COMPETE Public

    Competitive Occupancy: Multi-factor Profile Evaluation of a Thermodynamic Ensemble

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  6. TOP-paper-resources TOP-paper-resources Public

    TOP paper resources

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