Lists (26)
Academic Programming 📝
Reading, writing, citing in code45 repositories
AWS 🌥
26 repositories
C++
6 repositories
Cryo-EM
electron cryogenic microscopy3 repositories
Docker 🐳
9 repositories
Economics
1 repository
Genomics
Adapter trimming, quality-control, assembly, annotation, WGS, phylogenetics, etc.33 repositories
Go
3 repositories
Julia 🟣🔴🟢
27 repositories
LaTeX
1 repository
Machine & Deep Learning 🧠
101 repositories
🔬🔭 McPherson Lab Tools
20 repositories
Microbiome 🐛
metagenomics, microbial community profiling, etc.30 repositories
Molecular docking 💊
9 repositories
Molecular Dynamics (MD) and conformational ensembles
cryo-EM ensemble dynamics, time-resolved x-ray crystallography, alphafold2 heterogenous reconstruction, etc.11 repositories
Protein Folding
AlphaFold, OpenFold, ColabFold, etc.9 repositories
🐍 Python
116 repositories
R 🏴☠️
64 repositories
Rust 🏭
24 repositories
Scientific programming
99 repositories
SQL
7 repositories
Statistical programming
28 repositories
Structural Biology
10 repositories
Transcriptomics
RNA sequencing, single-cell RNA sequencing12 repositories
Virology 🦠
3 repositories
Website Development
7 repositories
Starred repositories
Flax is a neural network library for JAX that is designed for flexibility.
Neural Networks: Zero to Hero
A collection of notebooks/recipes showcasing some fun and effective ways of using Claude.
Generative AI reference workflows optimized for accelerated infrastructure and microservice architecture.
Anthropic's educational courses
Claude Code is an agentic coding tool that lives in your terminal, understands your codebase, and helps you code faster by executing routine tasks, explaining complex code, and handling git workflo…
Official PyTorch implementation for "Large Language Diffusion Models"
Langflow is a powerful tool for building and deploying AI-powered agents and workflows.
Qlib is an AI-oriented Quant investment platform that aims to use AI tech to empower Quant Research, from exploring ideas to implementing productions. Qlib supports diverse ML modeling paradigms, i…
分享 GitHub 上有趣、入门级的开源项目。Share interesting, entry-level open source projects on GitHub.
Collection of useful bioinformatic functions and tools for various computational biology pipelines
Free, simple, fast interactive diagrams for any GitHub repository
snakemake pipeline for creating trees from sequence sets
Templates for reproducible economics projects
Your AI second brain. Self-hostable. Get answers from the web or your docs. Build custom agents, schedule automations, do deep research. Turn any online or local LLM into your personal, autonomous …
Get up and running with Llama 3.3, DeepSeek-R1, Phi-4, Gemma 3, Mistral Small 3.1 and other large language models.
A pandoc LaTeX template to convert markdown files to PDF or LaTeX.
Graphical diagnostics for pharmacometric models
A curated collection of links for economists
This repository hosts the code behind the online book, Coding for Economists.
A curated list of awesome personal websites
A curated list of awesome actions to use on GitHub