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Decoding and geometrical analysis of neural activity with built-in best practices
An active learning platform for expert-guided, data efficient discovery of behavior.
Repository holding the jupyter notebooks and python packages used to generate figures in our paper: "Spontaneous behaviour is structured by reinforcement without explicit reward"
Learnable latent embeddings for joint behavioral and neural analysis - Official implementation of CEBRA
Software to control and record from multiple cameras
Info and sample codes for "NTU RGB+D Action Recognition Dataset"
A fast, scalable and light-weight C++ Fréchet and DTW distance library, exposed to python and focused on clustering of polygonal curves.
Template to run Streamlit apps on GitHub Codespaces
BehaveTrack uses user-specific B-SOiD classifier to predict behavior based on pose. Generate ethogram and summary statistics for animal recordings. Intuitive interface for tagging and grouping file…
benchmark plots for asoid vs deepethogram and simba
Getting started materials for DataJoint - with Calcium Imaging, Electrophysiology, Machine Learning examples
Hybrid behavioral tracking combining deep learning-based tracking and fiducial tags
talmolab / campy
Forked from ksseverson57/campyPython package for streaming video from multiple cameras to disk. Features real-time compression and debayering using FFmpeg.
PyRat is a user friendly library in python to analyze data from the DeepLabCut. Developed to help researchers unfamiliar with programming can perform animal behavior analysis more simpler.
Standalone utilities for SLEAP pose tracking data.
The fastest ⚡️ way to build data pipelines. Develop iteratively, deploy anywhere. ☁️
Publication-ready NN-architecture schematics.
DeepSqueak v3: Using Machine Vision to Accelerate Bioacoustics Research
Tips for releasing research code in Machine Learning (with official NeurIPS 2020 recommendations)
An open access book on scientific visualization using python and matplotlib