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gmap_nxf_module Public
Module designed to run GMAP/GMAPL/GSNAP via nextflow execution.
Nextflow UpdatedMar 3, 2025 -
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txome_refinement Public
transcriptome refinement leveraging the RNAseq nf-core pipeline
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orthology_map Public
orthology_map is a pipeline designed to integrate suite of orthology assignment tools to contribute in a consensus based scoring algorithm
Roff MIT License UpdatedSep 10, 2024 -
loupeR Public
Forked from 10XGenomics/loupeRConvert Seurat objects to 10x Genomics Loupe files.
R Other UpdatedJul 19, 2024 -
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gtf_insert Public
Insertion Algorithm for Novel Transcripts Into a Annotated Reference
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orthology_map_scripts Public
Custom scripts and databases used in orthology_map pipeline
Python UpdatedMay 6, 2024 -
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rnaseq_transcriptome_update Public
Forked from dxu104/rnaseq_transcriptome_updateRNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Nextflow MIT License UpdatedDec 28, 2023 -
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