8000 Sam-Sims (Sam Sims) · GitHub
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  1. kractor kractor Public

    Rapidly extract reads from a FASTQ file based on taxonomic classification via Kraken2.

    Rust 9

  2. ambigviz ambigviz Public

    Identify and plot ambiguous nucleotide bases at given positions from a BAM file.

    Rust 1

  3. fatcat fatcat Public

    A paged, pretty printer for viewing FASTQ files in the terminal.

    Rust 1

  4. fastalign fastalign Public

    Super fast multiple sequence alignments against a reference sequence.

    Rust 1

  5. realtime-train-display realtime-train-display Public

    Display realtime train depature information from any UK station using an SSD1322 OLED display and a Raspberry Pi zero.

    Python

  6. hashfasta hashfasta Public

    Quickly compute checksums for sequence data considering nucleotide sequences only

    Rust 1

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