Shuhua-Group
Population Omics
- 72 followers
- Shanghai, China
- https://pog.fudan.edu.cn
- xushua@fudan.edu.cn
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Showing 10 of 45 repositories
- PGG.Selection.Burden Public
Shuhua-Group/PGG.Selection.Burden’s past year of commit activity - PGG.Panel Public
Shuhua-Group/PGG.Panel’s past year of commit activity - CHIP-mutation-calling-NGS-pipeline Public
This pipeline based on snakemake calls CHIP variants from next-generation whole-exome/genome sequencing of human samples and produces a purely filtered VCF file containing high confident CHIP mutations.
Shuhua-Group/CHIP-mutation-calling-NGS-pipeline’s past year of commit activity - AncestryPainterV2 Public
An updated version of AncestryPainterV1, a graphing tool to display ancestry composition and genetic difference.
Shuhua-Group/AncestryPainterV2’s past year of commit activity - PanGenome_VCF_PostProcess Public
A simple pipeline to process the VCF deconstructed from the VG pangenome graph
Shuhua-Group/PanGenome_VCF_PostProcess’s past year of commit activity - Calculate.genetic.distance Public
This script can calculate the genetic distances of given variants based on their physical positions and genetic map files.
Shuhua-Group/Calculate.genetic.distance’s past year of commit activity
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