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fix: increment nc (number of clusters) when splitting cluster Tests #44: Commit c23dc2d pushed by TimD1
June 22, 2025 16:32 2m 28s dev
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June 22, 2025 16:32 2m 28s
fix: replaced obsolete CIGAR score test with NG50 test Tests #43: Commit 26d7aa4 pushed by TimD1
June 21, 2025 17:22 2m 38s dev
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June 21, 2025 17:22 2m 38s
feat: added --max-supercluster-size from v2 Tests #42: Commit 41cc0a0 pushed by TimD1
June 8, 2025 17:15 2m 29s dev
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June 8, 2025 17:15 2m 29s
feat: multi-match in Dijkstra Tests #41: Commit a87b7a7 pushed by TimD1
May 5, 2025 03:18 2m 34s dev
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May 5, 2025 03:18 2m 34s
fix: WFA pointers now packed into uint64_t Tests #40: Commit c062b8c pushed by TimD1
May 4, 2025 21:51 2m 33s dev
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May 4, 2025 21:51 2m 33s
feat: revert to single-pass evaluation Tests #39: Commit 159d6bc pushed by TimD1
May 4, 2025 17:47 2m 36s dev
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May 4, 2025 17:47 2m 36s
fix: if vs else if, continue if unallocated Tests #38: Commit 0e8f67b pushed by TimD1
May 4, 2025 04:45 2m 25s dev
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May 4, 2025 04:45 2m 25s
feat: pack WFA pointers Tests #37: Commit d350ca1 pushed by TimD1
May 3, 2025 14:41 2m 24s dev
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May 3, 2025 14:41 2m 24s
perf: clear WFA matrices ASAP Tests #36: Commit a0ebe8e pushed by TimD1
April 19, 2025 18:45 3m 14s dev
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April 19, 2025 18:45 3m 14s
feat: WFA only precision/recall alignment! Tests #35: Commit 099c255 pushed by TimD1
April 19, 2025 01:10 2m 36s dev
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April 19, 2025 01:10 2m 36s
fix: remove git-aware from pytest Tests #34: Commit 11efcb4 pushed by TimD1
April 6, 2025 15:39 2m 37s dev
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April 6, 2025 15:39 2m 37s
fix: avoid simple_cluster() failure on empty hap Tests #33: Commit 9fe9abf pushed by TimD1
April 5, 2025 15:35 2m 28s dev
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April 5, 2025 15:35 2m 28s
feat: automated run diff from known version Tests #32: Commit c6d48cc pushed by TimD1
February 14, 2025 19:49 2m 27s dev
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February 14, 2025 19:49 2m 27s
fix: clustering bugs Tests #31: Commit ddf5b30 pushed by TimD1
January 19, 2025 23:22 2m 24s dev
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January 19, 2025 23:22 2m 24s
fix: added chr20 of ref FASTA to repo test data Tests #30: Commit cb8b30a pushed by TimD1
January 19, 2025 20:45 2m 53s dev
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January 19, 2025 20:45 2m 53s
fix: added integration test data Tests #29: Commit 54d6b77 pushed by TimD1
January 15, 2025 02:43 2m 21s dev
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January 15, 2025 02:43 2m 21s
fix: added --git-aware to pytest Tests #28: Commit dc198cc pushed by TimD1
January 15, 2025 02:34 2m 22s dev
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January 15, 2025 02:34 2m 22s
fix: install pytest and pytest-workflow in CI Tests #27: Commit d7d5731 pushed by TimD1
January 15, 2025 02:02 2m 45s dev
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January 15, 2025 02:02 2m 45s
feat: added pytest to CI Tests #26: Commit d640a5d pushed by TimD1
January 15, 2025 01:57 1m 46s dev
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January 15, 2025 01:57 1m 46s
fix: off-by-one error in merging clusters Tests #25: Commit 71a0156 pushed by TimD1
December 23, 2024 20:45 1m 53s dev
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December 23, 2024 20:45 1m 53s
feat: print each variant subset Tests #24: Commit 3e2f251 pushed by TimD1
December 23, 2024 02:27 1m 49s dev
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December 23, 2024 02:27 1m 49s
fix: several bug fixes related to superclusters and start/end Tests #23: Commit 80b68be pushed by TimD1
December 23, 2024 00:00 2m 1s dev
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December 23, 2024 00:00 2m 1s
fix(ci): apt install liblzma Tests #22: Commit 880d897 pushed by TimD1
December 21, 2024 18:00 1m 57s dev
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December 21, 2024 18:00 1m 57s
fix(ci): apt install lib-bz2 Tests #21: Commit ef66479 pushed by TimD1
December 21, 2024 17:59 21s dev
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December 21, 2024 17:59 21s
fix(ci): github runner to ubuntu-24.04 Tests #20: Commit 0d46c53 pushed by TimD1
December 21, 2024 17:57 13s dev
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December 21, 2024 17:57 13s
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