This UK Biobank repository focuses on executing complex, multi-stage workflows on the UKB-RAP. By using tools such as Apps and applets, and Workflow Description Language (WDL), researchers can create scalable, parallelised, portable workflows that allow optimised computational resource control for large-scale analyses.
Currently, this repository comprises a single WDL workflow (WDL-vcf2bin) that was employed by UK Biobank in the conversion of Whole genome sequencing 200k pVCFs into Plink and BGEN formatted binaries.