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rnadeseq Public
Forked from qbic-pipelines/rnadeseqDifferential gene expression analysis and pathway analysis of RNAseq data
Nextflow MIT License UpdatedDec 13, 2024 -
differentialabundance Public
Forked from nf-core/differentialabundanceNextflow MIT License UpdatedNov 8, 2024 -
pipeline-docs Public
Forked from qbic-pipelines/pipeline-docsDocs for QBiC pipelines
UpdatedNov 8, 2024 -
modules Public
Forked from nf-core/modulesRepository to host tool-specific module files for the Nextflow DSL2 community!
Nextflow MIT License UpdatedApr 11, 2024 -
shinyngs Public
Forked from pinin4fjords/shinyngsShiny apps for NGS etc based on reusable components created using Shiny modules
HTML GNU Affero General Public License v3.0 UpdatedFeb 23, 2024 -
nf-validation Public
Forked from nextflow-io/nf-validationParams validation plugin for Nextflow pipelines
Groovy Apache License 2.0 UpdatedNov 21, 2023 -
multi-package-containers Public
Forked from BioContainers/multi-package-containersTesting building mulled containers for multi-requirement tools.
UpdatedOct 13, 2023 -
test-datasets Public
Forked from nf-core/test-datasetsTest data to be used for automated testing with the nf-core pipelines
MIT License UpdatedOct 2, 2023 -
bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell MIT License UpdatedMay 10, 2023 -
staged-recipes Public
Forked from conda-forge/staged-recipesA place to submit conda recipes before they become fully fledged conda-forge feedstocks
Python Apache License 2.0 UpdatedMay 4, 2023 -
sarek Public
Forked from nf-core/sarekAnalysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Nextflow MIT License UpdatedJul 27, 2022 -
mhcquant-1 Public
Forked from nf-core/mhcquantIdentify and quantify MHC eluted peptides from mass spectrometry raw data
Nextflow MIT License UpdatedMar 30, 2022 -
nf-co.re Public
Forked from nf-core/websiteCode and files for the main nf-core website.
PHP MIT License UpdatedMar 17, 2022 -