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Paired-Damage-seq Public
Forked from czhulab/Paired-Damage-seqSingle-cell joint analysis of transcriptome with oxidative DNA damage and single-stranded breaks.
Jupyter Notebook Creative Commons Zero v1.0 Universal UpdatedMar 24, 2025 -
SnapATAC2 Public
Forked from kaizhang/SnapATAC2Single-cell epigenomics analysis tools
Python UpdatedMar 14, 2025 -
neural_organoid_atlas Public
Forked from theislab/neural_organoid_atlasReproducibility repository for the Human Neural Organoid Atlas publication
Jupyter Notebook UpdatedDec 16, 2024 -
SIMPLE-seq Public
Forked from czhulab/SIMPLE-seqJoint analysis of 5mC and 5hmC from single cells
Perl UpdatedMay 23, 2024 -
SnapATAC Public
Forked from r3fang/SnapATACAnalysis Pipeline for Single Cell ATAC-seq
R GNU General Public License v3.0 UpdatedApr 27, 2023 -
Paired-Tag Public
Forked from czhulab/Paired-TagAnalysis of Paired-Tag datasets
C++ UpdatedJan 27, 2022 -
SnapTools Public
Forked from r3fang/SnapToolsA module for working with snap files in Python
Python Apache License 2.0 UpdatedMay 5, 2020