Releases: YuelongWu/feabas
v3.0.1
major update
Please note that backward compatibility with version 2.x is not guaranteed in this release.
Major changes:
The user settings will be populated with default settings where they are undefined in the user config file.
Thumbnail alignment now stands on its own.
Added a "chunked" alignment workflow that should be easier to parallelize compared to the original "slide window" method.
Added mipmapping function for tensorstore rendered volume.
The working directory can now sit in a GCP bucket.
After the initial matching step for stitching, a translational optimization will be applied, followed by a re-match based on the optimized tile locations. This may help in situations where stage coordinates were not provided accurately.
A deformation budget is defined in config.py to prevent excessive deformation in mesh relaxation.
material_table config file changed from json to yaml with comments.
v2.1.1
v2.1.0
- now the stitch rendering step doesn't have to use the full resolution of the raw data
- added subpixel accuracy to template matching
- allowed applying a geodesic mask to the image during template matching
- reworked the workflow of thumbnail downsampling
- multiple bug fixes.