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  • Peking University
  • Beijing, China

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Code accompanying the paper "Generalized Interpolating Discrete Diffusion"

Python 77 8 Updated Apr 24, 2025

Public Release of ProGen3 family of Models

Python 50 6 Updated Apr 25, 2025

Lets make video diffusion practical!

Python 11,706 951 Updated May 4, 2025

Structure-based fragment identification in latent space

Python 15 1 Updated Apr 11, 2025
Jupyter Notebook 15 Updated Apr 13, 2025

TrajCast: Force-Free MD Through Autoregressive Equivariant Networks

Python 49 9 Updated Apr 28, 2025

Generation of protein sequences and evolutionary alignments via discrete diffusion models

Python 583 92 Updated Feb 7, 2025

A command-line interface and Python library for generating AlphaFold3 input files.

Python 22 7 Updated Apr 28, 2025

ATOMICA: Learning Universal Representations of Intermolecular Interactions

Python 137 15 Updated Apr 24, 2025

Vector (and Scalar) Quantization, in Pytorch

Python 3,197 258 Updated May 3, 2025

Official implementation of All Atom Diffusion Transformers

Python 182 19 Updated Apr 22, 2025

PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.

Python 118 19 Updated Mar 7, 2025

An Industrial-Level Controllable and Efficient Zero-Shot Text-To-Speech System

Python 1,548 134 Updated Apr 25, 2025

Qwen2.5-Omni is an end-to-end multimodal model by Qwen team at Alibaba Cloud, capable of understanding text, audio, vision, video, and performing real-time speech generation.

Jupyter Notebook 2,831 212 Updated May 3, 2025

EDM2 and Autoguidance -- Official PyTorch implementation

Python 701 37 Updated Dec 9, 2024

Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and relies on a tailored scalable transformer architecture.

Python 156 16 Updated Mar 1, 2025
Python 69 7 Updated Feb 11, 2025

Official Implemetation of DPLM (ICML'24) - Diffusion Language Models Are Versatile Protein Learners

C++ 156 15 Updated May 2, 2025

Inference code for scalable emulation of protein equilibrium ensembles with generative deep learning

Python 363 60 Updated Apr 30, 2025

CREST - A program for the automated exploration of low-energy molecular chemical space.

Fortran 240 49 Updated Apr 22, 2025

Helpful tools and examples for working with flex-attention

Python 748 44 Updated Apr 11, 2025

Block Diffusion: Interpolating Between Autoregressive and Diffusion Language Models

Python 568 31 Updated Apr 16, 2025

Knowledge-Guided Diffusion Model for 3D Ligand-Pharmacophore Mapping

Python 33 6 Updated Apr 25, 2025

reasoning model trained using GRPO towards rosetta REF2015 for protein stability

Python 65 6 Updated May 1, 2025

No fortress, purely open ground. OpenManus is Coming.

Python 45,113 7,774 Updated Apr 28, 2025

A Python Package for Protein Dynamics Analysis

Python 470 162 Updated Apr 30, 2025
Python 368 73 Updated Feb 6, 2025

🧬 ReQFlow: Rectified Quaternion Flow for Efficient and High-Quality Protein Backbone Generation [ICML 2025]

Python 74 5 Updated May 3, 2025
Python 194 53 Updated Apr 15, 2025

DeepGEMM: clean and efficient FP8 GEMM kernels with fine-grained scaling

Python 5,285 577 Updated Apr 28, 2025
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