This repository has a few python scripts which I have written to optomize a few procedures for my collaborators
-
Metabolomics
- parse_mgf_by_feature_ID.py
-
Parses mgf file by feature number. Input is a .txt which is a list of features you want to keep and the mgf file which you want to shorten
Interative notebook here ->
-
- parse_mgf_by_feature_ID.py
-
Graphics
- bicluster.py
- Generates a bicluster hierarchical cluster from in input csv using the seaborn package
- bicluster.py
-
Videomics
- conversion.py
- Converts all .mov's in a folder to a series of .tiff's.
- conversion.py
