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A database of useful gene signatures for single-cell analysis

R 25 Updated May 19, 2025

Code to reproduce the results by Yerly et al. (2024)

5 Updated Dec 17, 2024

Methods to discover gene programs on single-cell data

R 121 8 Updated Apr 24, 2025

Gene set scoring for single-cell data

R 153 17 Updated May 7, 2025

Cell type gating models for scGate

4 3 Updated Sep 30, 2024

Coarse-graining of large single-cell RNA-seq data into metacells

R 81 13 Updated Aug 29, 2024

R toolkit for the analysis of single-cell chromatin data

R 374 98 Updated Jan 17, 2025
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