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An ISO TC 34/SC 9 working group 25 repository for draft ontology-driven specifications referenced in the draft working document ISO/TC 34/SC 9 N 000 "Microbiology of the Food Chain — Whole Genome S…

2 Updated May 3, 2019
Nextflow 4 1 Updated Nov 30, 2023

Pipeline for the identification of (coding) gene structures in draft genomes.

Nextflow 28 14 Updated May 9, 2024

Generate XML files for submission to the European Nucleotide Archive (ENA)

Python 7 Updated May 16, 2025

MIRACUM-Pipe is a whole exome and panel sequencing pipeline for precision oncology (https://github.com/AG-Boerries/MIRACUM-Pipe). This repository is a port of the pipeline running inside a singular…

R 4 1 Updated Oct 24, 2023

MYSQL-based genome database template

1 Updated Oct 19, 2011

A simple psql genome db api...

Ruby 1 Updated Sep 6, 2011

api to a simple locus db

Ruby 1 Updated Nov 1, 2011

A simple API to the Rfam database

1 Updated Aug 8, 2011

A loose collection of mixins and libs, packaged as a gem

Ruby 1 Updated Aug 25, 2011

A loose collection of mixins and libs, packaged as a gem

1 Updated Aug 5, 2011

A simple genome database API

1 Updated Aug 5, 2011

A ruby API to the Ensembl database

Ruby 1 Updated May 2, 2011

A ruby API to the Ensembl database

Ruby 40 17 Updated Aug 18, 2011
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