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Multiple Protein Structure Alignment at Scale with FoldMason
Small Libraries of Protein Fragments Accurately Model Native Protein Structures
Up to 10x faster strings for C, C++, Python, Rust, Swift & Go, leveraging NEON, AVX2, AVX-512, SVE, & SWAR to accelerate search, hashing, sort, edit distances, and memory ops 🦖
fusion transcript detection using long reads, leveraging ctat-minimap2 and FusionInspector
Reference implementations of minimizer schemes to go with the mod-minimizers paper.
🚀🎉📚 Boilerplate and Starter for Next.js 15 with App Router and Page Router support, Tailwind CSS 4 and TypeScript ⚡️ Made with developer experience first: Next.js + TypeScript + ESLint + Prettier +…
A latex template for writing statement-of-purpose for many schools at the same time
A high-performance, zero-overhead, extensible Python compiler with built-in NumPy support
HyperMinHash: Bringing intersections to HyperLogLog
Pipeline components for real-time phylodynamic analysis
A bioinformatic toolkit to align genome assemblies into pangenome graphs
Bayesian Evolutionary Analysis Sampling Trees
BESCA (Beyond Single Cell Analysis) offers python functions for single-cell analysis
A new markup-based typesetting system that is powerful and easy to learn.
One Dark theme for JetBrains.
MapReduce, Spark, Java, and Scala for Data Algorithms Book
STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data
EPFL summaries & cheatsheets over 5 years (computer science, communication systems, data science and computational neuroscience).
A pairwise sequence aligner written in Rust