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CS345 Spring 2025

Jupyter Notebook 4 2 Updated Jan 15, 2025

Linux Desktop Application for the Logitech Spotlight device (and similar devices) - Digital Laser Pointer

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C++ and Python library for Polarizable Embedding

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SIB course on single cell transcriptomics by mostly using the Seurat pipeline

R 84 39 Updated Mar 12, 2025

Desktop tool for managing virtual machines via libvirt

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Friends don't let friends make certain types of data visualization - What are they and why are they bad.

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🧬 gget enables efficient querying of genomic reference databases

Python 1,042 75 Updated Jul 8, 2025

Public repository for vol 2 of The Art of HPC: parallel programming

TeX 86 32 Updated Jun 8, 2025

Interactive roadmaps, guides and other educational content to help developers grow in their careers.

TypeScript 330,921 42,333 Updated Jul 10, 2025

A tool for evaluating the predictive performance on activity cliff compounds of machine learning models

Python 187 25 Updated Feb 15, 2025

Enhanced sampling methods for molecular dynamics simulations

TeX 37 3 Updated Dec 16, 2022

Modern, extensible Python project management

Python 6,693 335 Updated Apr 7, 2025

The toolkit for building extension modules

Python 25 Updated May 1, 2023

Official repo of the modular BioExcel version of HADDOCK

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Python 3,816 538 Updated Jul 10, 2025

Open source API-compatible alternative to the text editor Sublime Text

15,300 1,060 Updated Jan 2, 2021
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Specifications and tools for 360º video and spatial audio.

Python 1,945 441 Updated Jul 2, 2025

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Jupyter Notebook 10 1 Updated Jun 26, 2024

Python implementation of Dynamical Network Analysis

Python 13 2 Updated Mar 19, 2025

Python client for Alpaca's trade API

Python 1,813 546 Updated Dec 2, 2024

This mini course will get you started in R and the RStudio Environment. It is meant to be self-guided as you watch videos and work through activities to learn R.

HTML 6 1 Updated Nov 16, 2022
Python 3,259 523 Updated Jul 30, 2024

Materials for STAT 991: Topics In Modern Statistical Learning (UPenn, 2022 Spring) - uncertainty quantification, conformal prediction, calibration, etc

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R Package 📦 Containing the Datasaurus Dozen datasets 📊

R 330 48 Updated Jan 23, 2025

Fast PBC wrapping and unwrapping for VMD

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Broad introduction to Python3, from basic Python to scientific modules.

Jupyter Notebook 4 Updated Mar 15, 2023

Jupyter Notebooks that are part of the plotnine documentation

Jupyter Notebook 1 Updated Aug 7, 2018

MDAnalysis is a Python library to analyze molecular dynamics simulations.

Python 1,439 718 Updated Jul 8, 2025
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