Bioinformatics Engineer, lead developer within BIXU team at the Center for Data Driven Discovery (D3b) at the Children's Hospital of Philadelphia (CHOP).
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Stars
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
Sentieon workflow for Kids-First
Non-Negative Matrix Factorization for Gene Expression Clustering
DNAseq alignment pipelines for use on HPC systems.