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Generation of protein sequences and evolutionary alignments via discrete diffusion models

Python 601 99 Updated May 29, 2025

A curated list of awesome deep learning applications in the field of computational biology

1,923 314 Updated Nov 7, 2021

Computational workflows for metagenomics tasks, by the Bhatt lab

Python 47 16 Updated Feb 6, 2023

A curated list of awesome Bioinformatics libraries and software.

3,471 639 Updated Mar 21, 2025

A command line tool to identify and annotate small proteins in microbial sequencing datasets.

Python 21 4 Updated Mar 25, 2023

Public facing deeplift repo

Python 856 169 Updated Apr 28, 2022
Jupyter Notebook 293 88 Updated Nov 5, 2021

The Unity Machine Learning Agents Toolkit (ML-Agents) is an open-source project that enables games and simulations to serve as environments for training intelligent agents using deep reinforcement …

C# 18,182 4,282 Updated May 30, 2025

Essential introductory materials to get into computational biology.

38 10 Updated Jun 24, 2024

This is the main control board for the Maslow CNC router. It is designed to mate with an Arduino Mega 2560

138 55 Updated May 3, 2021

Maslow Firmware

C++ 269 134 Updated Jul 26, 2022

This is the Ground Control software used to control the Maslow CNC Machine

Python 285 121 Updated May 22, 2023

The open hardware knitting machine (at the moment based in electronic Brother knitting machines)

Processing 218 57 Updated Feb 17, 2022

Circular Knitic, an open hardware knitting machine

C++ 225 41 Updated Feb 17, 2022

Python Data Science Handbook: full text in Jupyter Notebooks

Jupyter Notebook 44,605 18,321 Updated Jun 26, 2024

The Jupyter Notebooks behind my OReilly report, "A Whirlwind Tour of Python"

Jupyter Notebook 3,828 1,669 Updated Jan 31, 2024

Code for the book Grokking Algorithms (https://www.amazon.com/dp/1633438538)

JavaScript 12,467 3,937 Updated May 1, 2025

openpilot is an operating system for robotics. Currently, it upgrades the driver assistance system on 300+ supported cars.

Python 54,011 9,782 Updated Jun 1, 2025

all open source hardware from comma.ai

1,668 634 Updated Feb 17, 2025

freeCodeCamp.org's open-source codebase and curriculum. Learn math, programming, and computer science for free.

TypeScript 419,550 40,276 Updated May 31, 2025

The Open Source Data Science Masters

25,442 6,157 Updated Dec 3, 2023

Recipes for bioinformatics analyses with scikit-bio

Jupyter Notebook 42 22 Updated Jun 15, 2016

Tools for developing and testing command line interfaces in Python.

Python 9 13 Updated May 3, 2016

Official QIIME 1 software repository. QIIME 2 (https://qiime2.org) has succeeded QIIME 1 as of January 2018.

Python 286 263 Updated Dec 19, 2022

scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.

Python 941 274 Updated May 31, 2025

Qiita - A multi-omics databasing effort

Python 124 81 Updated May 27, 2025

Programming exercises for the Stanford Unsupervised Feature Learning and Deep Learning Tutorial

2,618 1,590 Updated May 12, 2021

Code and data for the Quick Start Guide to R in Azure Machine Learning Studio.

R 14 14 Updated Dec 5, 2014

This repo contains all the code and data necessary to explore non-linear regression using Azure ML.

R 63 49 Updated Oct 27, 2015
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