Replica exchange Hamiltonian swaps as bias #90
Merged
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
In i-Pi REX, force components under the
<forces>
tag are not swapped between replicas. Only force components under the<bias>
tag can be exchanged (along with ensemble variables).Here, we check the Hamiltonian of every replica, listing shared components (e.g.,
MACEHamiltonian
) under<forces>
and specific components (e.g., umbrellaPlumedHamiltonian
) under<bias>
.fixes #87